Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012089.1 Corchorus capsularis cultivar CVL-1 contig12110, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30552

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1707--1754
18
2.6
19
83
9
55
14
22
2
60
1.45
14161--14263
34
3.1
33
88
4
145
28
19
26
26
1.99
25102--25140
19
2.1
19
90
4
62
30
20
2
46
1.64
25123--25152
11
2.7
11
94
0
51
40
20
0
40
1.52
25093--25152
22
2.9
22
76
19
65
35
18
3
43
1.67
26263--26291
14
2.1
14
100
0
58
58
13
0
27
1.36
26562--26600
21
1.9
19
85
10
51
43
17
10
28
1.82
28136--28193
15
3.9
15
93
0
98
8
27
22
41
1.83
29276--29314
18
2.2
18
90
4
62
20
15
7
56
1.63
29637--29662
6
4.3
6
100
0
52
50
15
0
34
1.45

Tables:   1

The End!