Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012091.1 Corchorus capsularis cultivar CVL-1 contig12112, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22794

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3724--3759
19
1.9
18
88
5
54
33
22
2
41
1.68
9344--9377
11
3.2
10
84
15
50
50
17
2
29
1.61
11804--11855
18
3.1
18
78
10
65
51
0
1
46
1.12
13364--13398
2
17.5
2
93
0
61
48
0
2
48
1.16
15697--15745
21
2.3
21
85
0
62
10
32
28
28
1.90
17553--17590
12
3.2
12
88
7
51
0
57
10
31
1.32
19313--19507
56
3.4
55
86
6
255
32
16
10
40
1.83
20626--20764
44
3.2
44
92
0
215
28
15
25
30
1.96

Tables:   1

The End!