Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012096.1 Corchorus capsularis cultivar CVL-1 contig12117, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21422

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2415--2466
21
2.4
22
90
3
79
75
5
13
5
1.18
2458--2488
12
2.6
12
94
0
53
87
0
3
9
0.66
2819--2867
12
4.0
12
83
2
62
75
2
22
0
0.90
3767--3793
11
2.5
11
100
0
54
92
0
7
0
0.38
4210--4252
10
4.1
10
82
11
50
81
4
2
11
0.93
4217--4268
22
2.2
22
86
10
68
76
7
5
9
1.14
14639--14674
19
1.9
18
88
5
54
33
22
2
41
1.68
15353--15399
13
3.5
13
72
16
51
12
25
0
61
1.31
15350--15425
27
2.8
27
84
9
93
15
22
0
61
1.33
15547--15643
21
4.5
21
84
2
113
21
20
7
50
1.72
15514--15673
22
7.5
21
77
8
130
20
21
6
51
1.69
15648--15774
35
3.6
35
84
5
148
18
23
3
54
1.60
15749--15788
14
2.9
14
84
0
53
22
22
2
52
1.59
16001--16189
47
3.6
53
80
10
194
23
17
9
49
1.76
17003--17229
50
4.5
50
79
4
226
33
15
6
43
1.73
17005--17244
101
2.4
100
79
7
263
35
15
6
42
1.73
17741--18317
288
2.0
287
97
1
1084
26
25
16
31
1.97

Tables:   1

The End!