Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001210.1 Corchorus capsularis cultivar CVL-1 contig01210, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5357

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
370--471
30
3.4
30
71
12
111
32
19
21
26
1.97
398--560
29
5.5
29
68
15
118
32
19
20
28
1.96
370--588
59
3.7
59
86
6
273
33
18
21
26
1.96
632--770
31
4.6
30
73
14
97
30
17
17
35
1.93
691--767
30
2.5
31
91
2
120
29
20
15
33
1.94

Tables:   1

The End!