Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012101.1 Corchorus capsularis cultivar CVL-1 contig12122, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3857

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
766--872
50
2.1
50
86
3
144
33
17
13
35
1.89
1214--1306
30
3.3
27
72
22
66
53
15
20
10
1.71
1387--1748
69
5.2
70
80
5
378
24
28
19
26
1.99
1387--1748
139
2.6
138
92
2
577
24
28
19
26
1.99
1862--2003
47
3.0
48
87
2
205
20
23
21
34
1.97

Tables:   1

The End!