Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012110.1 Corchorus capsularis cultivar CVL-1 contig12131, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8378

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
170--276
30
3.6
30
93
0
178
10
27
14
48
1.75
1072--1096
13
1.9
13
100
0
50
48
16
0
36
1.46
2435--2535
31
3.0
32
85
14
150
19
16
21
41
1.90
2433--2537
37
3.0
37
74
20
125
20
16
22
40
1.90
5545--5656
55
2.0
55
98
0
215
45
5
9
39
1.60

Tables:   1

The End!