Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012117.1 Corchorus capsularis cultivar CVL-1 contig12138, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31490

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7817--8170
173
2.0
178
88
5
538
40
12
13
33
1.82
19820--19858
20
2.0
19
85
14
53
28
0
5
66
1.12
19635--20068
229
1.9
223
92
2
733
32
4
8
55
1.50
20759--20823
30
2.1
31
91
2
105
27
18
4
49
1.67
21039--21293
22
11.6
23
73
12
128
42
8
14
34
1.77
21123--21290
44
3.8
44
74
5
144
41
9
13
35
1.77
21374--21645
44
6.3
42
70
15
132
42
8
12
36
1.73
21388--21535
22
6.7
22
70
11
90
43
8
12
35
1.73
21563--21643
25
3.5
23
83
11
87
41
7
9
40
1.66
23414--23442
1
29.0
1
100
0
58
0
0
0
100
0.00
24458--24482
12
2.1
12
100
0
50
52
0
32
16
1.44
25398--25440
20
2.1
20
87
12
61
60
6
0
32
1.23
25841--25897
30
1.9
30
89
7
89
43
12
5
38
1.65

Tables:   1

The End!