Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012121.1 Corchorus capsularis cultivar CVL-1 contig12142, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41943

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4719--4836
33
3.5
32
78
11
112
8
25
42
23
1.82
9206--9245
20
2.0
20
90
9
64
7
10
10
72
1.28
11209--11241
11
3.0
11
91
8
50
0
33
36
30
1.58
14184--14232
21
2.3
21
82
6
55
14
28
16
40
1.87
17177--17259
29
2.9
28
69
16
71
16
10
3
68
1.33
24324--24376
21
2.6
21
87
3
72
28
32
32
7
1.85
29206--29256
6
8.7
6
97
2
95
52
13
0
33
1.41
31784--31828
23
2.0
23
82
8
56
31
8
13
46
1.74
41714--41752
20
1.9
21
89
5
62
23
20
0
56
1.42

Tables:   1

The End!