Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012123.1 Corchorus capsularis cultivar CVL-1 contig12144, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24993

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
864--888
11
2.3
11
100
0
50
36
0
0
64
0.94
5016--5101
9
9.6
9
70
9
68
38
13
39
8
1.75
5022--5100
18
4.4
18
96
0
122
36
13
41
7
1.74
7301--7341
20
2.0
20
100
0
82
31
14
29
24
1.95
8924--8948
11
2.3
11
100
0
50
68
16
8
8
1.38
12699--12758
18
3.3
18
83
0
75
21
28
23
26
1.99
16585--16662
31
2.5
30
83
6
93
34
20
14
30
1.92

Tables:   1

The End!