Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012124.1 Corchorus capsularis cultivar CVL-1 contig12145, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41172

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18576--18657
35
2.3
35
100
0
164
32
13
8
45
1.74
30878--30990
16
7.1
16
68
20
67
9
16
34
38
1.82
30878--30990
32
3.6
31
79
10
113
9
16
34
38
1.82
31798--31886
9
10.8
9
69
18
59
11
20
35
32
1.88
31806--31924
16
7.4
16
74
3
105
9
21
36
33
1.85
31808--31924
48
2.4
48
82
2
137
9
21
36
32
1.85
33819--33896
2
43.5
2
71
25
59
47
1
1
50
1.17
33814--33896
24
3.6
24
75
16
86
48
1
1
49
1.16
38333--39350
256
4.0
257
90
2
1539
35
16
12
35
1.87
40756--40798
21
2.0
21
86
0
59
18
34
9
37
1.83

Tables:   1

The End!