Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012132.1 Corchorus capsularis cultivar CVL-1 contig12153, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10518

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4243--4287
8
5.9
8
89
7
67
53
24
0
22
1.46
4243--4279
15
2.5
15
100
0
74
54
27
0
18
1.44
4239--4288
23
2.2
24
85
10
77
52
26
0
22
1.48
9117--9270
53
2.9
53
91
2
229
38
27
14
18
1.90
9225--9326
30
3.4
30
74
12
102
39
31
13
15
1.87

Tables:   1

The End!