Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012133.1 Corchorus capsularis cultivar CVL-1 contig12154, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35708

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112--251
35
4.0
35
82
6
178
19
22
2
55
1.57
165--287
7
17.7
7
66
20
53
19
23
2
54
1.56
155--196
20
2.0
21
86
4
59
16
26
2
54
1.54
398--437
11
3.0
14
73
26
50
17
22
7
52
1.69
366--562
51
3.8
52
93
2
335
16
19
7
55
1.65
367--562
26
7.6
26
76
13
208
16
19
7
56
1.64
627--757
21
7.0
20
62
23
61
22
22
9
45
1.82
563--791
111
2.1
110
91
3
372
24
19
8
47
1.77
563--791
56
4.2
55
92
2
363
24
19
8
47
1.77
1333--1733
51
7.9
51
83
5
465
35
18
4
41
1.71
4222--4297
27
2.7
29
81
8
102
40
25
17
17
1.90
8708--8769
31
2.0
32
93
3
108
29
16
27
27
1.97
10734--10766
17
1.9
17
100
0
66
12
6
12
69
1.35
31726--31782
9
6.3
9
81
0
51
29
35
0
35
1.58
31730--31784
18
3.1
18
69
10
58
29
34
0
36
1.58

Tables:   1

The End!