Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012135.1 Corchorus capsularis cultivar CVL-1 contig12156, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24121

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3351--3386
9
4.0
9
92
0
63
47
0
30
22
1.52
4607--4634
2
14.0
2
100
0
56
50
0
0
50
1.00
9810--9874
32
2.0
32
96
0
121
32
16
27
23
1.96
13103--13134
3
10.7
3
100
0
64
31
0
0
68
0.90
13419--13478
30
2.0
30
96
0
111
21
3
25
50
1.64
15403--15477
27
2.8
27
63
15
64
29
10
22
37
1.88
17820--17844
8
3.1
8
100
0
50
52
36
12
0
1.39

Tables:   1

The End!