Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012138.1 Corchorus capsularis cultivar CVL-1 contig12159, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13261

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--366
200
1.8
201
89
1
579
33
15
17
33
1.91
481--522
20
2.1
20
90
0
66
26
9
23
40
1.85
3138--3170
17
1.9
17
93
0
57
36
15
3
45
1.61
3228--3445
109
2.0
108
83
4
269
45
7
10
35
1.68
4781--4819
2
19.5
2
89
10
62
48
0
2
48
1.15
5658--5749
31
2.9
30
82
6
103
46
2
18
32
1.61
5771--5822
12
4.2
12
80
5
59
48
0
17
34
1.48
6131--6159
2
14.5
2
100
0
58
51
0
0
48
1.00
9886--9954
3
23.0
3
84
0
93
4
33
1
60
1.25

Tables:   1

The End!