Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001214.1 Corchorus capsularis cultivar CVL-1 contig01214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1038

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--272
22
12.5
21
71
15
162
34
14
9
40
1.79
19--103
23
3.7
23
84
1
100
37
14
7
41
1.73
8--103
46
2.1
46
84
3
124
36
15
8
39
1.78
170--272
45
2.3
43
77
11
118
35
11
11
40
1.78
352--579
22
10.5
22
71
15
111
32
15
8
43
1.77
441--650
22
9.4
22
69
19
75
35
15
9
40
1.80
656--714
22
2.7
22
79
10
66
35
16
10
37
1.83
750--798
22
2.2
22
85
0
62
42
24
6
26
1.78
804--879
22
3.5
22
87
3
100
36
17
10
35
1.84
804--913
44
2.5
44
78
10
109
39
17
9
34
1.81
849--909
22
2.8
22
75
7
61
39
14
8
37
1.76

Tables:   1

The End!