Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012141.1 Corchorus capsularis cultivar CVL-1 contig12162, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4698

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
656--1130
51
9.4
50
78
3
495
41
5
16
36
1.71
665--1127
101
4.6
100
91
1
721
40
5
16
37
1.72
1807--2302
55
9.1
55
95
1
881
50
7
16
25
1.70
1807--2302
164
3.0
164
96
0
895
50
7
16
25
1.70
2518--2776
22
12.0
22
73
13
189
55
6
19
18
1.64
2537--2776
42
5.6
42
80
7
218
55
7
20
17
1.65
2583--2675
14
6.7
13
70
11
51
56
3
20
19
1.55
2518--2775
21
12.0
21
73
14
179
55
6
19
18
1.65
2679--2892
118
1.8
116
83
6
279
55
8
19
16
1.66
2792--2889
21
4.5
22
75
21
82
54
7
18
20
1.67

Tables:   1

The End!