Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012145.1 Corchorus capsularis cultivar CVL-1 contig12166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23358

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8502--8551
21
2.4
21
89
0
73
56
2
38
4
1.30
14615--14746
42
3.2
42
91
4
200
42
11
20
25
1.85
14891--15099
11
19.0
11
77
5
208
45
9
18
26
1.80
14891--15099
22
9.5
22
81
6
235
45
9
18
26
1.80
14891--15099
33
6.3
33
82
7
246
45
9
18
26
1.80
14893--15130
11
21.6
11
77
6
178
47
9
19
23
1.79
15123--15448
36
8.9
36
88
3
454
44
9
22
23
1.82
15120--15452
108
3.0
109
92
5
555
44
9
22
23
1.82
15477--15584
32
3.2
32
78
14
128
48
6
17
27
1.72
15487--15605
36
3.4
35
79
13
147
47
6
18
27
1.74
15474--15605
68
1.9
68
92
3
221
47
6
18
27
1.72
17280--17313
16
2.2
16
89
5
52
58
8
2
29
1.43
21248--21275
14
2.0
14
100
0
56
14
35
14
35
1.86

Tables:   1

The End!