Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012146.1 Corchorus capsularis cultivar CVL-1 contig12167, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34163

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18--246
77
3.1
74
87
10
308
37
12
0
50
1.40
9990--10020
14
2.2
14
100
0
62
48
16
12
22
1.80
10090--10203
37
3.1
37
98
0
219
21
10
7
59
1.56
15335--15371
2
19.0
2
94
5
67
51
0
0
48
1.00
32648--32702
12
4.5
12
95
4
101
34
16
23
25
1.95
32648--32702
25
2.2
24
96
3
101
34
16
23
25
1.95
33712--33747
10
3.6
10
92
0
63
30
5
22
41
1.76
33709--33747
20
2.0
20
100
0
78
30
5
20
43
1.73

Tables:   1

The End!