Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012149.1 Corchorus capsularis cultivar CVL-1 contig12170, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25608

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
590--635
23
2.0
23
95
0
83
32
21
19
26
1.97
1019--1095
32
2.4
32
91
0
118
37
7
22
32
1.83
1993--2034
11
3.7
11
79
17
50
42
0
2
54
1.13
2748--2774
13
2.1
13
100
0
54
29
7
0
62
1.22
2739--2780
22
1.9
22
90
9
68
23
9
0
66
1.21
4065--4097
2
17.0
2
93
6
59
48
0
0
51
1.00
11188--11265
29
2.7
28
77
15
86
39
29
14
16
1.88
16419--16447
4
7.2
4
100
0
58
24
0
0
75
0.80
25204--25256
26
2.0
26
100
0
106
30
15
7
47
1.73

Tables:   1

The End!