Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012151.1 Corchorus capsularis cultivar CVL-1 contig12172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48698

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11831--11855
13
1.9
13
100
0
50
48
0
4
48
1.20
12903--12935
11
2.8
12
90
9
50
30
0
0
69
0.88
14464--14503
20
2.0
21
95
5
73
30
17
17
35
1.93
14512--14615
51
2.0
51
98
0
199
40
8
18
32
1.81
16626--16665
18
2.2
18
95
0
71
42
15
17
25
1.88
18653--18732
28
2.8
28
88
9
108
26
23
12
37
1.90
21690--21743
28
1.9
28
92
7
92
22
22
16
38
1.93
21772--21827
27
2.0
28
93
3
96
25
14
33
26
1.94
26337--26361
2
12.5
2
100
0
50
48
0
0
52
1.00
30645--30891
78
3.2
78
92
1
388
51
0
13
34
1.45
30801--30845
22
2.1
22
87
4
65
64
0
11
24
1.26
30817--30860
17
2.6
16
82
10
52
63
0
4
31
1.14
37854--37884
15
2.1
15
100
0
62
19
0
54
25
1.44

Tables:   1

The End!