Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012153.1 Corchorus capsularis cultivar CVL-1 contig12174, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40725

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8086--8361
49
5.6
48
89
1
365
30
15
31
22
1.95
8087--8360
147
1.9
147
89
3
426
30
15
31
22
1.95
8814--8849
19
1.9
18
88
5
54
41
2
22
33
1.68
14370--14423
28
1.9
28
88
7
83
29
27
27
14
1.95
33834--33868
11
3.2
11
91
0
61
80
17
2
0
0.84
34189--34221
16
2.0
17
94
5
59
84
0
15
0
0.61
34988--35274
103
2.8
103
90
2
423
40
11
10
37
1.76
35526--35555
15
2.0
15
93
0
51
83
0
6
10
0.81
37050--37163
55
2.1
54
90
1
174
25
14
22
36
1.93
38234--38311
41
1.9
41
94
0
138
39
7
24
28
1.83

Tables:   1

The End!