Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012155.1 Corchorus capsularis cultivar CVL-1 contig12176, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16350

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5697--5775
28
2.9
28
90
1
115
15
18
22
43
1.88
8320--8460
33
4.3
33
83
5
126
8
27
42
21
1.81
12483--12517
5
7.0
5
86
0
52
20
0
0
80
0.72
12591--12624
8
4.1
8
85
7
50
23
2
14
58
1.50
13533--13673
33
4.3
32
82
7
131
8
26
43
21
1.81
15030--15055
2
13.0
2
100
0
52
50
0
0
50
1.00
15397--15464
27
2.5
26
88
9
93
14
19
23
42
1.88
15982--16020
20
2.0
20
89
0
60
28
10
20
41
1.85

Tables:   1

The End!