Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012156.1 Corchorus capsularis cultivar CVL-1 contig12177, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27705

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3822--3886
27
2.4
27
92
0
112
33
26
23
16
1.96
5233--5339
53
2.0
53
96
0
196
35
16
19
28
1.94
11160--11186
2
13.5
2
100
0
54
51
0
0
48
1.00
13172--13209
16
2.4
17
86
8
53
26
5
21
47
1.71
19540--19573
17
2.0
17
88
0
50
61
5
26
5
1.42
27603--27629
13
2.1
13
100
0
54
85
14
0
0
0.61

Tables:   1

The End!