Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012159.1 Corchorus capsularis cultivar CVL-1 contig12180, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47118

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--44
3
12.3
3
100
0
74
67
0
0
32
0.91
6205--6231
14
1.9
14
100
0
54
22
22
18
37
1.95
15962--16032
37
1.9
37
85
0
97
33
15
14
36
1.87
16357--16385
15
2.0
15
93
6
51
75
0
24
0
0.80
16545--16617
28
2.6
29
77
14
73
65
0
21
12
1.25
18514--18591
37
2.1
38
95
2
140
15
15
6
62
1.51
20998--21027
2
15.0
2
100
0
60
50
0
0
50
1.00
22970--23115
74
2.0
73
85
7
199
33
13
6
45
1.70
38296--38326
2
16.0
2
93
6
55
48
0
0
51
1.00
38371--38487
44
2.6
45
89
1
173
41
11
9
38
1.73

Tables:   1

The End!