Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012168.1 Corchorus capsularis cultivar CVL-1 contig12189, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11150

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68--324
129
2.0
129
93
0
325
30
19
19
31
1.96
2962--3003
12
3.8
11
85
14
52
90
9
0
0
0.45
2963--3009
17
2.8
16
90
6
67
87
12
0
0
0.55
2962--3003
19
2.3
18
91
4
66
90
9
0
0
0.45
4990--5029
20
2.0
20
85
0
53
25
57
0
17
1.40
7138--7185
2
25.0
2
83
8
64
50
0
2
47
1.12
8731--8773
19
2.4
19
84
7
54
46
11
27
13
1.78

Tables:   1

The End!