Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012169.1 Corchorus capsularis cultivar CVL-1 contig12190, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13528

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5578--5613
19
1.9
19
88
5
56
11
2
27
58
1.46
5916--5982
35
1.9
35
93
0
116
50
4
29
14
1.63
9163--9221
32
1.9
31
86
10
86
33
30
6
28
1.83
13227--13297
36
2.0
36
97
0
133
38
5
21
35
1.77
13360--13392
2
17.0
2
87
6
50
45
0
0
54
0.99

Tables:   1

The End!