Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012173.1 Corchorus capsularis cultivar CVL-1 contig12194, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6776

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--50
2
25.0
2
91
0
82
0
54
0
46
1.00
1256--1526
138
1.9
141
88
5
408
41
17
10
30
1.83
2453--2488
14
2.6
14
95
0
63
19
2
44
33
1.65
2867--2921
13
4.4
13
78
19
55
72
0
27
0
0.85
2872--2912
15
2.7
15
84
3
55
75
0
24
0
0.80
2884--2920
15
2.4
17
78
21
53
75
0
24
0
0.80
3786--3825
20
2.0
20
85
0
53
15
7
20
57
1.61
5776--5861
43
2.0
44
88
2
129
29
5
19
45
1.74

Tables:   1

The End!