Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012177.1 Corchorus capsularis cultivar CVL-1 contig12198, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24345

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
189--226
6
6.2
6
87
6
58
2
18
0
78
0.86
189--225
19
1.9
19
94
0
65
2
18
0
78
0.87
3449--3478
2
15.0
2
100
0
60
50
0
0
50
1.00
5830--6041
87
2.4
87
75
12
218
32
6
22
38
1.79
7943--8017
37
2.0
37
92
0
123
28
8
13
50
1.69
7965--8097
59
2.3
59
97
0
248
27
4
18
50
1.66
20599--20641
21
2.0
22
90
4
70
48
18
32
0
1.48

Tables:   1

The End!