Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012178.1 Corchorus capsularis cultivar CVL-1 contig12199, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14384

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1159--1206
18
2.7
18
75
12
53
8
25
27
39
1.84
1773--1995
90
2.5
90
88
2
304
37
16
12
33
1.86
5732--5773
20
2.0
21
95
4
77
35
23
23
16
1.95
10617--10644
3
9.3
3
100
0
56
64
0
35
0
0.94
11025--11058
17
2.0
17
88
11
52
44
17
5
32
1.73

Tables:   1

The End!