Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012183.1 Corchorus capsularis cultivar CVL-1 contig12204, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16530

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1496--1521
6
4.3
6
100
0
52
34
0
0
65
0.93
2796--2834
19
2.1
19
90
9
62
64
0
5
30
1.15
2854--2904
16
3.5
15
75
22
54
1
29
1
66
1.13
4642--4687
23
2.0
23
87
8
67
21
13
10
54
1.69
5734--5814
12
6.8
12
71
0
54
14
27
19
38
1.91
5748--5814
24
2.8
24
79
0
71
13
25
20
40
1.89
6112--6457
174
2.0
175
91
2
572
34
5
23
36
1.78
8750--8810
31
2.0
31
96
0
113
40
9
8
40
1.68
10469--10506
19
2.0
19
94
0
67
36
2
31
28
1.71
12446--12516
38
1.9
37
88
5
108
47
22
12
16
1.80
14758--14820
31
2.0
31
84
6
83
34
14
12
38
1.84
14996--15087
44
2.1
44
95
0
166
25
14
8
52
1.70
15034--15177
72
2.0
72
95
0
261
27
17
11
44
1.82
15432--15457
7
3.7
7
100
0
52
46
15
38
0
1.46

Tables:   1

The End!