Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012186.1 Corchorus capsularis cultivar CVL-1 contig12207, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19694

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--101
32
2.9
32
85
1
125
10
42
39
7
1.68
20--158
33
4.3
33
82
0
138
11
35
40
12
1.79
6931--6956
2
13.0
2
100
0
52
50
0
0
50
1.00
9254--9295
21
2.0
21
86
4
59
23
35
4
35
1.76
9451--9497
11
3.9
11
80
20
58
55
10
0
34
1.35
9441--9534
26
3.6
26
92
0
152
54
12
1
31
1.45
9652--9676
11
2.3
11
100
0
50
28
0
0
72
0.86
19491--19525
9
3.8
9
85
7
52
51
14
0
34
1.42

Tables:   1

The End!