Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012190.1 Corchorus capsularis cultivar CVL-1 contig12211, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19965

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1026--1083
23
2.5
23
75
13
64
37
5
8
48
1.56
10005--10062
19
2.9
19
82
5
62
31
18
12
37
1.88
10283--10340
25
2.4
23
85
5
71
32
22
1
43
1.64
10381--10483
26
4.0
26
75
14
97
55
9
1
33
1.44
10565--10593
11
2.5
12
94
5
51
34
0
0
65
0.93
17845--17873
2
15.0
2
92
7
51
51
0
0
48
1.00

Tables:   1

The End!