Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012191.1 Corchorus capsularis cultivar CVL-1 contig12212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15501

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1414--1555
41
3.3
41
70
21
112
48
2
1
47
1.22
1452--1530
39
2.0
40
87
9
117
50
3
2
43
1.33
1413--1547
39
3.4
37
73
22
114
50
2
1
45
1.23
1430--1547
13
9.5
12
71
19
82
50
2
1
44
1.25
2013--2096
42
2.0
42
97
0
159
40
22
4
32
1.75
11609--11794
93
2.0
93
100
0
372
43
15
6
35
1.72

Tables:   1

The End!