Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012195.1 Corchorus capsularis cultivar CVL-1 contig12216, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26212

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
470--554
35
2.4
36
78
9
104
15
12
20
51
1.75
14292--14344
27
2.0
27
85
7
74
39
9
1
49
1.46
17797--17833
11
3.4
11
88
0
56
35
13
8
43
1.74
20103--20146
19
2.3
19
92
0
70
40
2
0
56
1.11
20209--20304
38
2.6
37
85
3
138
14
19
10
55
1.68
21475--21512
19
1.9
19
85
15
51
31
5
0
63
1.17
21683--21866
22
8.3
22
72
11
106
33
8
18
39
1.82
21684--21811
44
2.9
44
88
4
170
35
10
16
37
1.82
21715--21859
44
3.3
43
86
7
175
34
10
17
37
1.84
21902--22295
22
17.7
22
68
16
129
42
9
13
34
1.78
22377--22691
22
14.5
22
71
10
150
39
8
15
35
1.79
22587--22689
23
4.5
23
79
4
102
36
6
15
40
1.74
22587--22691
45
2.3
46
82
8
126
37
7
15
40
1.76

Tables:   1

The End!