Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012196.1 Corchorus capsularis cultivar CVL-1 contig12217, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6511

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22--1163
199
5.7
199
84
4
1394
34
18
13
33
1.89
1--1163
400
2.9
395
85
4
1504
34
18
13
33
1.90
1374--1407
10
3.3
10
84
8
50
61
23
0
14
1.33
2179--2617
198
2.2
195
85
3
587
33
19
13
33
1.91
2179--2671
198
2.5
194
81
8
564
33
19
14
33
1.92
3316--3349
12
2.7
13
86
4
52
64
8
5
20
1.43
3294--3337
23
1.9
23
81
9
54
59
13
4
22
1.53

Tables:   1

The End!