Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012197.1 Corchorus capsularis cultivar CVL-1 contig12218, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22694

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5993--6023
3
10.3
3
92
0
53
70
0
29
0
0.87
8101--8167
33
2.0
33
94
0
116
19
11
25
43
1.85
20419--20449
14
2.2
14
100
0
62
12
6
6
74
1.21
20595--20697
32
3.2
32
88
2
154
16
10
34
37
1.83
20593--20685
16
5.9
15
69
15
62
18
8
34
38
1.81
20593--20697
16
6.6
15
69
14
59
16
10
36
37
1.83
20893--20949
15
3.7
15
79
6
60
7
10
31
50
1.63

Tables:   1

The End!