Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012202.1 Corchorus capsularis cultivar CVL-1 contig12223, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42972

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13612--13698
45
1.9
45
90
4
140
24
18
21
35
1.95
30840--30896
23
2.5
23
74
5
62
14
8
7
70
1.33
30857--30885
13
2.1
14
93
6
51
20
6
13
58
1.58
31070--31155
31
2.8
31
83
0
109
18
27
25
27
1.98
31138--31188
24
2.1
24
96
0
93
15
31
25
27
1.96
37009--37054
22
2.1
22
100
0
92
17
21
23
36
1.94
39632--39661
16
1.9
15
93
6
51
86
3
10
0
0.67

Tables:   1

The End!