Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012207.1 Corchorus capsularis cultivar CVL-1 contig12228, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22524

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1079--1103
2
12.5
2
100
0
50
0
52
0
48
1.00
10793--10819
2
13.5
2
100
0
54
51
48
0
0
1.00
17425--17555
67
2.0
67
89
3
201
28
11
19
40
1.86
17770--18085
149
2.1
148
93
2
544
34
12
8
44
1.73
18038--18084
22
2.2
22
84
3
60
27
14
4
53
1.60
18267--18369
46
2.3
43
79
11
107
36
13
8
40
1.76
18292--18368
23
3.4
23
81
1
93
36
12
6
44
1.69
18103--18486
22
17.6
22
69
12
152
36
15
9
38
1.80
18425--18466
21
2.1
20
86
8
59
38
9
4
47
1.57
18628--18681
22
2.6
21
85
8
83
37
11
5
46
1.63
18636--19000
22
16.4
22
68
15
108
34
16
9
40
1.80
18759--18836
25
3.5
22
79
8
61
34
12
8
43
1.74
19151--19188
19
2.0
20
85
15
53
63
2
5
28
1.30
20546--20596
15
3.6
15
69
15
54
58
0
7
33
1.27

Tables:   1

The End!