Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012208.1 Corchorus capsularis cultivar CVL-1 contig12229, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  93387

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11698--11724
14
1.9
14
100
0
54
66
0
0
33
0.92
23819--23889
31
2.3
31
92
0
115
35
30
11
22
1.89
24979--25010
14
2.3
14
94
0
55
15
18
15
50
1.79
33603--33653
20
2.5
21
83
6
77
54
15
3
25
1.58
38682--38715
5
6.4
5
90
10
50
79
0
20
0
0.73
46407--46431
12
2.1
12
100
0
50
24
8
20
48
1.76
46881--46913
6
5.5
6
100
0
66
48
18
33
0
1.48
54404--54442
20
1.9
20
84
5
51
46
2
15
35
1.60
55541--55567
7
3.9
7
100
0
54
70
0
14
14
1.17
56325--56369
18
2.5
19
75
10
51
17
20
11
51
1.75
81014--81059
23
2.0
23
83
8
58
13
34
13
39
1.83
81734--81763
14
2.1
14
93
0
51
60
0
0
40
0.97
84062--84431
109
3.5
108
92
4
610
42
9
8
40
1.66
85585--85619
15
2.3
15
90
0
52
20
5
31
42
1.75

Tables:   1

The End!