Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012214.1 Corchorus capsularis cultivar CVL-1 contig12235, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16013

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1353--1389
17
2.2
17
95
0
65
21
37
13
27
1.91
3324--3561
22
10.9
21
73
14
144
35
8
19
36
1.82
7367--7417
2
28.0
2
77
18
58
50
0
0
49
1.00
8441--8496
23
2.4
23
90
0
85
44
19
3
32
1.68
12853--12941
35
2.4
36
83
7
108
61
5
11
21
1.49
15920--15964
21
2.1
21
91
0
72
17
35
11
35
1.86

Tables:   1

The End!