Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012215.1 Corchorus capsularis cultivar CVL-1 contig12236, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13652

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
184--228
21
2.1
21
87
0
63
17
28
11
42
1.84
460--561
32
3.1
32
79
8
116
8
37
40
13
1.76
627--742
33
3.5
31
80
15
96
11
41
34
12
1.79
811--914
32
3.2
32
97
0
190
13
26
44
15
1.84
1301--1391
46
2.0
46
86
0
128
45
9
26
18
1.81
2956--3071
58
1.9
61
86
6
166
37
15
13
33
1.87
4703--4737
17
2.1
17
94
0
61
54
17
8
20
1.68
5553--5652
27
3.7
27
87
0
155
21
17
41
21
1.91
9964--10225
131
2.0
133
82
8
320
31
16
19
33
1.94
13118--13149
13
2.5
13
94
0
55
31
6
50
12
1.65
13589--13624
15
2.3
16
90
4
56
36
8
11
44
1.70

Tables:   1

The End!