Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012218.1 Corchorus capsularis cultivar CVL-1 contig12239, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23926

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--81
2
37.5
2
100
0
150
0
49
0
50
1.00
7248--7288
21
2.0
20
85
4
55
17
14
4
63
1.47
8526--9308
168
4.7
167
82
3
869
24
18
20
37
1.94
8526--9289
330
2.3
331
83
4
894
24
18
19
37
1.94
9874--10126
66
3.8
66
95
0
461
27
15
34
22
1.94
15962--16009
16
2.9
17
78
9
55
16
6
35
41
1.74
15955--16062
32
3.4
32
84
5
121
13
10
36
39
1.79
16265--16355
16
5.7
16
78
10
96
6
9
30
52
1.60
16265--16343
32
2.5
32
85
0
113
5
10
30
54
1.55
23145--23219
30
2.5
30
80
8
80
30
26
13
29
1.94

Tables:   1

The End!