Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012221.1 Corchorus capsularis cultivar CVL-1 contig12242, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37330

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15110--15138
12
2.3
13
94
5
51
27
0
0
72
0.85
15863--15887
12
2.1
12
100
0
50
0
24
0
76
0.80
17014--17085
32
2.2
32
85
2
99
13
38
40
6
1.72
17462--17511
23
2.2
23
92
0
82
26
16
34
24
1.95
18186--18398
22
9.8
22
69
10
71
34
13
11
40
1.81
18315--18400
45
1.9
45
80
4
102
37
15
11
36
1.83
18510--18718
22
9.7
22
67
13
112
35
16
8
39
1.79
18869--19264
22
17.7
22
68
16
104
35
16
10
37
1.83
18991--19266
22
12.5
22
71
13
149
36
17
9
35
1.83
18991--19235
44
5.5
44
74
12
182
36
17
9
35
1.83
19005--19266
134
2.0
134
79
8
293
37
17
10
34
1.84
19433--19470
19
2.0
20
85
15
53
63
2
5
28
1.30
19652--19717
31
2.1
32
86
5
91
45
3
21
30
1.67
23768--23802
19
1.9
17
88
11
52
42
0
25
31
1.55
31128--31153
3
8.7
3
100
0
52
30
0
0
69
0.89
36584--36625
2
21.5
2
87
4
59
45
2
0
52
1.13
36844--36876
3
11.0
3
100
0
66
66
0
0
33
0.92

Tables:   1

The End!