Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012227.1 Corchorus capsularis cultivar CVL-1 contig12248, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31739

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7733--7791
27
2.3
25
85
8
75
64
11
5
18
1.44
15297--15337
21
2.0
21
85
0
55
29
21
9
39
1.86
15801--15845
16
2.8
16
100
0
90
13
37
28
20
1.90
15963--16013
19
2.6
19
85
11
68
70
1
0
27
0.98
15964--16015
6
8.2
6
85
10
59
67
1
0
30
1.02
26311--26346
19
1.9
18
88
5
54
30
22
5
41
1.76
27354--27378
2
12.5
2
100
0
50
48
0
0
52
1.00
28147--28221
9
8.6
9
73
15
68
42
2
1
53
1.23
31472--31501
15
2.0
15
93
0
51
50
13
0
36
1.42

Tables:   1

The End!