Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012232.1 Corchorus capsularis cultivar CVL-1 contig12253, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6961

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3087--3128
21
2.0
21
95
0
75
19
26
33
21
1.97
3108--3213
33
3.2
32
82
5
113
20
39
29
10
1.86
3127--3246
33
3.6
32
80
8
107
22
43
25
8
1.81
4153--4186
8
4.1
8
85
7
50
58
14
2
23
1.50
5734--5838
33
3.2
33
78
5
122
23
9
22
43
1.82
5787--5874
33
2.7
32
79
11
81
27
9
20
43
1.82
5854--5936
30
2.6
31
74
12
80
33
8
19
38
1.82

Tables:   1

The End!