Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012237.1 Corchorus capsularis cultivar CVL-1 contig12258, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28790

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11906--11939
3
11.3
3
100
0
68
0
32
0
67
0.91
15539--15727
103
1.9
101
83
4
245
27
11
23
37
1.89
15748--15980
98
2.3
101
82
7
264
27
12
18
40
1.88
21475--21512
18
2.1
18
95
0
67
26
7
34
31
1.85
21941--22226
156
1.8
156
79
5
337
34
19
15
30
1.93
23537--23568
2
16.0
2
100
0
64
50
0
0
50
1.00
23568--23594
2
13.5
2
100
0
54
0
48
0
51
1.00

Tables:   1

The End!