Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012239.1 Corchorus capsularis cultivar CVL-1 contig12260, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19829

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4219--4321
54
1.9
54
92
4
172
36
13
30
19
1.90
9505--9556
15
3.1
17
73
15
63
30
28
13
26
1.94
9525--9580
15
3.7
15
72
13
60
25
28
21
25
1.99
9478--9579
33
3.2
33
90
2
154
29
25
17
27
1.98
15389--15416
13
2.2
13
100
0
56
21
46
17
14
1.84
18388--18413
10
2.6
10
100
0
52
50
19
7
23
1.73

Tables:   1

The End!