Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012241.1 Corchorus capsularis cultivar CVL-1 contig12262, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16874

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
741--798
28
2.1
28
100
0
116
55
6
3
34
1.44
6557--6590
6
5.7
6
100
0
68
35
35
0
29
1.58
7385--7414
6
5.0
6
100
0
60
33
0
16
50
1.46
13269--13372
33
3.2
33
87
2
158
30
25
16
26
1.97
14684--14811
63
2.1
61
92
2
211
32
9
17
41
1.81
15614--15658
25
1.9
24
86
13
67
42
2
8
46
1.47
16256--16280
13
1.9
13
100
0
50
32
20
8
40
1.81

Tables:   1

The End!