Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012242.1 Corchorus capsularis cultivar CVL-1 contig12263, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9570

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35--99
27
2.4
27
79
7
69
58
0
24
16
1.38
1574--1683
42
2.7
39
78
17
100
24
21
12
40
1.88
2724--2777
15
3.8
14
80
9
56
46
7
11
35
1.67
2724--2782
14
4.3
13
79
14
57
42
6
11
38
1.68
3435--3497
13
5.0
13
82
3
67
79
0
20
0
0.73
4069--4116
13
3.7
13
81
8
53
83
0
16
0
0.65
4079--4116
17
2.2
17
90
9
60
81
0
18
0
0.69
9382--9477
38
2.5
39
82
3
113
51
6
20
21
1.70
9469--9541
32
2.3
31
81
6
83
45
6
26
21
1.77

Tables:   1

The End!