Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012248.1 Corchorus capsularis cultivar CVL-1 contig12269, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20445

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
817--892
33
2.3
32
84
10
100
7
27
42
22
1.81
3940--4045
33
3.2
32
81
5
113
20
41
28
9
1.83
3940--4069
33
4.0
32
84
6
109
20
41
27
10
1.84
12136--12245
33
3.3
33
92
2
175
44
20
10
25
1.82
12271--12375
33
3.2
33
76
2
113
47
19
9
23
1.78
13375--13433
30
2.0
30
86
0
82
11
25
38
23
1.89
17852--17896
13
3.5
13
90
3
74
22
13
8
55
1.65
18528--18608
33
2.5
33
81
0
90
23
8
23
44
1.81
18555--18624
33
2.1
33
84
5
88
25
7
21
45
1.77
19034--19092
30
2.0
30
86
6
84
32
16
28
22
1.96

Tables:   1

The End!